External Linking - Internal Linking
Morphbank provides an option to link deposited images to any external link and link any site back to Morphbank. Published Morphbank images may be linked to any Web site or database for educational and non-profit purposes (see Morphbank copyright information http://morphbank.net/About/Copyright/).
- Links may include other databases, NCBI accession numbers, location maps, publications, other Morphbank records, etc.
- Links may be included at the time of image deposition in the Excel spreadsheet or on the Morphbank Web site or after the image data is deposited in Morphbank.
- For each link, a label must be provided describing the link. The label determines how the link will appear on the Morphbank Single Show page.
- Links may be associated with any Morphbank table. So, they can appear in the Specimen record, Image record, Locality record, View record, etc.
Embed an Image in an external Web site
- Images in Morphbank may also be linked to other Web sites, online keys, species pages, etc. using only the path that links to the .jpeg of that image (i.e. http://www.morphbank.net?id=133776&imgType=jpeg). This path can easily be found by clicking on the .jpg icon from a search results page, in the navigation bar of that page.
- All links to embedded images are formed the same way with
http://www.morphbank.net?id= as the base of the URL + the Morphbank ID for that object (in this case 133776) + &imgType=jpeg (specification of image type) - Image sizing:
The same image is found on Morphbank in multiple sizes that may be useful for linking.
These sizes include a thumbnail (95X70), medium jpg (400X300), large jpeg, large tiff and a user-defined size. These sizes may be found by changing the path
name. If:
http://www.morphbank.net?id=133776&imgType=jpeg is the full size jpeg image then
http://www.morphbank.net?id=133776&imgType=tiff is the tiff,
http://www.morphbank.net?id=133776&imgType=jpg is the medium sized image and
http://www.morphbank.net?id=133776&imgType=thumb is the thumbnail image.
http://www.morphbank.net?id=133776&imgType=jpg&imgSize=500 is the jpg image where a user desires an image with a defined width, in this case, 500 pixels. The user may insert the number of pixels to constrain the image to the size that works best for their purpose.
<img src="http://www.morphbank.net?id=133776&imgType=thumb" />
Linking from an external source to Morphbank:
- The Morphbank Id for each record is unique. These records with unique ids include: collections, specimens, images, views, locations, annotations, publications, character collections and OTUs. Thus unique links can be formed in this manner to any of these Morphbank records.
- All links to Morphbank records are formed the same way with
http://www.morphbank.net?id= as the base of the URL + the Morphbank ID for that object (in this case 64122) - An entire link to one specific specimen record may look like this: http://www.morphbank.net/Show/?id=64122.
http://www.morphbank.net/Show/?id=65847.
Linking back to the Morphbank record provides a valuable increase in available information associated with the image to include data about the locality, collector, specimen, contributor, etc. This increases the value of the image to a webpage. For those interested in using images deposited on Morphbank for online keys and Web sites, please contact Morphbank admin mbadmin at scs dot fsu dot edu for options and suggestions.
Note: Morphbank is an Entrez LinkOut ( http://www.ncbi.nlm.nih.gov/entrez/linkout/) provider for the Nucleotide ( http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Nucleotide) and Taxonomy ( http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Taxonomy) databases. Morphbank will provide NCBI with the accession numbers and ids that are sent for the purpose of linking GenBank back to images of voucher specimens on Morphbank. Morphbank also provides links for NCBI taxonomy using images deposited in Morphbank. These links are updated periodically. If only GenBank accession numbers and Morphbank ids are involved, then the full URL does not need to be provided, but only the accession number. Data for external links may also be accepted in tab delimited or comma delimited text files.
Make a link on a Morphbank record
When logged-in and browsing, a Morphbank user can add external links to objects they've contributed or submitted to
Morphbank. To supply external links for images, specimens, views, locations and publications already deposited in Morphbank, browse
for the desired object and click on the
edit icon. For images and other objects
already deposited in Morphbank the label and link information will need to be associated with the actual Morphbank record id. This id is unique
to each record and is located at the top of each Morphbank record.
After clicking on the
edit icon, go to the
bottom of the Edit screen and click on "Add Links." A Contributor/Submitter will supply external links in this
same place during the submitting process, if submitting throught the web interface.
Click on the blue highlighted text, Add Links, from the Submit, Locality, Specimen, View or Image page. This will
bring up the external links submit/edit form as seen below.
- Type: Select from the drop-down list the appropriate link type. Selections might include, Institution, GenBank, Publications, Google Maps or Other
- Label: Type in a short, descriptive label. This label is the name of the link that will appear on the Morphbank record page. Appropriate labels would include the name of the institution that the link is going back to or the name of the gene region that is linking to an accession number. Examples: Google Map, CO1, AMNH. Make sure the label is brief.
- URL: Enter or cut and paste the URL where the link is located.
- Description: Free text entry about the link. Example: comment about the institution that is being linked to.
- To add more than one link, click on the plus sign. The minus sign will remove any link not needed.
icon
appears in My Manager. It's done
exactly as described above once the edit icon is clicked. Also links can be edited or deleted after a record is published.
Image Record Show - sample External Links
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